[gmx-users] Stacking

Discussion:

Bratin Kumar Das

6 years ago

Dear all,
I have one pdb structure obtained from the solution NMR. It is
a peptide fragment. I want to stack it for studying aggression studies. How
I can do that. Any suggestions are highly appreciable.

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Justin Lemkul

6 years ago

Permalink

Post by Bratin Kumar Das
Dear all,
I have one pdb structure obtained from the solution NMR. It is
a peptide fragment. I want to stack it for studying aggression studies. How
I can do that. Any suggestions are highly appreciable.

Use editconf to manipulate the coordinates (rotate, translate) and
concatenate the coordinate files with cat.

-Justin
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Justin A. Lemkul, Ph.D.
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